Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACACTCCAGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047417703
GeneSymbolCCNJL
Binding site1132,1149
Score1.0
Seed1
Au0.397
Energy-15.7
Binding len10
Me-14.322
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure