Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTGCAATGGTGA
((((((((((..(((((((...&)))))))..)))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001115007
GeneSymbolLIN54
Binding site2743,2767
Score0.846
Seed1
Au0.412
Energy-22.3
Binding len24
Me-10.109
Phylopstem0.8875247785714286
Phylopflank0.5691662000000001
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure