Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTGCAATGGTGA
((((((((((..(((((((...&)))))))..)))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001115008
GeneSymbolLIN54
Binding site2933,2957
Score0.846
Seed1
Au0.412
Energy-22.3
Binding len24
Me-10.109
Phylopstem0.7111036928571429
Phylopflank0.4049744537500001
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure