Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCATGTCATGTCAGGC
.(((((((((((..((((....&))))..))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346516
GeneSymbolLCOR
Binding site6569,6588
Score0.846
Seed1
Au0.529
Energy-18.1
Binding len19
Me-5.939
Phylopstem-0.38381732499999993
Phylopflank0.2507399025000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure