Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACATGATTGCAGTTGGGAT
((.(((((((((((((..(((&)))..))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417744
GeneSymbolPTCD2
Binding site6656,6678
Score1.0
Seed0
Au0.603
Energy-20.2
Binding len22
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure