Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGAACAGCCCGGGGGAGGGCTTAGGTGG
(((((((((.(((((((((...&.))))))))).)))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122608
GeneSymbolHCCS
Binding site100,133
Score0.846
Seed1
Au0.471
Energy-23.3
Binding len23
Me-5.18
Phylopstem-0.17685588888888892
Phylopflank0.023171331249999955
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure