Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTGTCAGAGAAGAGTCAT
...((((((.((((((((((((&))))))..)))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122608
GeneSymbolHCCS
Binding site471,493
Score0.846
Seed0
Au0.574
Energy-20.4
Binding len22
Me-7.757
Phylopstem2.892694252857143
Phylopflank4.428209088499999
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure