Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGCCCGGACCCCCACAGACCTCGGGAAGGCGCTGGGCCGAGCCAGTGT
(((((((((((((((((((...&.))).))))))))..........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122636
GeneSymbolGALNT9
Binding site2205,2255
Score0.846
Seed1
Au0.279
Energy-26.6
Binding len32
Me-3.938
Phylopstem2.0153937933333332
Phylopflank3.8133594937499997
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end5
Position3UTR
2D Structure