Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCAAACAGAAAGGGAGTCCGAGTGG
((((((((((((((((((((((&))))))...)))))))).)).)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122769
GeneSymbolLCA5
Binding site672,701
Score0.846
Seed1
Au0.456
Energy-26.9
Binding len29
Me-3.938
Phylopstem0.29805525714285713
Phylopflank0.29783292750000007
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure