Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCAGGGAGGAGTGAGC
..((.((((((((((((((...&))).))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122834
GeneSymbolHHAT
Binding site3203,3222
Score0.923
Seed0
Au0.5
Energy-25.2
Binding len19
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure