Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAGTGTGGACAACGTCCAGTT
.(((((((((.((((((((...&))))))))...)))....).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001122837
GeneSymbolSLC50A1
Binding site165,191
Score0.923
Seed1
Au0.426
Energy-19.4
Binding len26
Me-6.618
Phylopstem4.126317785714287
Phylopflank2.413874905
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end5
PositionCDS
2D Structure