Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCATAAGCTGGGTG
(((((((.....(((((((((.&)))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001122847
GeneSymbolSLC6A12
Binding site1740,1759
Score0.846
Seed1
Au0.529
Energy-17.0
Binding len19
Me-14.722
Phylopstem5.329519
Phylopflank3.2046692137499995
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure