Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACCAGTGGCCAGGC
.((((((.(((...((((((((&))))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001122965
GeneSymbolRPTN
Binding site701,721
Score1.0
Seed1
Au0.574
Energy-20.5
Binding len20
Me-11.6
Phylopstem0.911920875
Phylopflank0.34742256675000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure