Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACACATTTAAAACACCAGAAAAGGAGCCT
....(((((((((((((((...&.)).))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001123363
GeneSymbolRGPD6
Binding site5093,5124
Score0.872
Seed0
Au0.632
Energy-23.8
Binding len19
Me-9.547
Phylopstem0.8443906694117649
Phylopflank1.8748465017499996
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure