Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGAGAGAGGAAAGAGGGAGTATCAGAGGTTGCCGGG
..(((((((((((((.(((...&))).))))))))....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001123366
GeneSymbolHMSD
Binding site1161,1199
Score0.846
Seed1
Au0.471
Energy-21.2
Binding len38
Me-5.19
Phylopstem-0.41969035757575757
Phylopflank-0.15708193250000002
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end4
Position3UTR
2D Structure