Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTA
.((((((((((((((((((...&))))))))........))))...................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001124767
GeneSymbolSMIM4
Binding site1452,1498
Score0.897
Seed1
Au0.456
Energy-21.8
Binding len46
Me-3.793
Phylopstem-0.026841919111111123
Phylopflank-0.11058802174999999
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end5
Position3UTR
2D Structure