Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTTAGCACAAAGAGCAACCTGCTATTGTGTCGCCAGCGTG
((((((((((((((((((....&.)))).))))))).))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001126049
GeneSymbolKLLN
Binding site661,704
Score0.923
Seed1
Au0.441
Energy-21.1
Binding len23
Me-3.938
Phylopstem-0.38500557142857145
Phylopflank-0.23017915
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position5UTR
2D Structure