Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCACCTGTGTGCCAGGA
.(((((((((((.((((.....&))))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001126336
GeneSymbolVCAN
Binding site1399,1417
Score0.846
Seed1
Au0.515
Energy-22.2
Binding len18
Me-5.082
Phylopstem4.141950909090909
Phylopflank3.8182876337499994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure