Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACGTATGCACCTGTGTGCCAGGATACAGCGGAGACCAGTGT
((((((((((.((((((((((.&))))...............))))))......)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001126336
GeneSymbolVCAN
Binding site1392,1435
Score0.846
Seed1
Au0.544
Energy-21.5
Binding len43
Me-6.762
Phylopstem3.6288844680000008
Phylopflank3.717819125
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure