Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCCAGAGAGAGGCCAC
...(((((.((((((((((...&)).)))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001126339
GeneSymbolTHTPA
Binding site1017,1035
Score0.846
Seed0
Au0.426
Energy-21.9
Binding len18
Me-7.571
Phylopstem-0.0020091818181818214
Phylopflank1.16474854625
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure