Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGAGGGTTGTTTACTCC&GGAGTACAGTGGCACGATCTTGGTTGACTGCAACCTCTGTCTCCTGGG
(((((((((((((((.((((((&)))))).......................)))))))...)))))))).
Details
MiRNAhsa-miR-30c-1-3p
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site1290,1338
Score0.846
Seed1
Au0.456
Energy-23.6
Binding len48
Me-4.171
Phylopstem4.101664888888889
Phylopflank3.0318417899999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure