Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGATAAGAACAGAGGCCCAGAT&GTCCAGGGTCTCATTTTGTCAC
.((((((((...(((((((.(((&)))..))))))).)))))))).
Details
MiRNAhsa-miR-3161
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site1261,1283
Score0.923
Seed1
Au0.471
Energy-18.9
Binding len22
Me-11.207
Phylopstem4.559637499999999
Phylopflank2.924675990000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure