Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGACACTTCTGAACTTGGA&TCCAAGTAGCTGGGACTGCAGGTGCATGCCACCACACTCGGATTGTGTCAAAATCTCAATTGCCATCTGAG
(((((((((.((((((((((((&)))))))..............................)))))..))))).................)))).
Details
MiRNAhsa-miR-5000-3p
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site1364,1435
Score0.846
Seed1
Au0.559
Energy-17.7
Binding len71
Me-5.18
Phylopstem3.6070552142857144
Phylopflank3.2626594775000006
Longest consecutive pairings7
Position of longest consecutive pairings64
Pairings in 3prime end8
PositionCDS
2D Structure