Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTCAGGGATTGGATGGAGG&CCTCTGTCTCCTGGGCTCA
..(((((((((....(((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5088-5p
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site1323,1342
Score0.923
Seed1
Au0.485
Energy-26.9
Binding len19
Me-11.185
Phylopstem3.387227555555555
Phylopflank2.832623714999999
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure