Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGTTATTGCGGTTTTGGCT&AGCCAAGACTGCACCACTG
...(((...(((((((((((((&)))))))))))))..))).
Details
MiRNAhsa-miR-548at-5p
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site2533,2552
Score1.0
Seed0
Au0.426
Energy-21.2
Binding len19
Me-11.428
Phylopstem-0.2770440769230769
Phylopflank-0.30956096022500024
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure