Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGCAAGGAAAGAAGAGGATCA&GTCCTTTAGCAATCAATGCATTTAATCTTTCCTGGATGGCTGCCAT
((((((((((((((((((((..&)))))))..................)))))))).......))))).
Details
MiRNAhsa-miR-6809-5p
RefseqIDNM_001127181
GeneSymbolCENPL
Binding site1610,1656
Score0.846
Seed1
Au0.574
Energy-19.6
Binding len46
Me-3.938
Phylopstem0.4222105266666666
Phylopflank1.06036102375
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure