Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGGACCCACCTGTGGGGCCTGGGGAGCCCACTGAGGGGCCAGG
..((((((((((..(((((...&.)))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127190
GeneSymbolCSK
Binding site1697,1743
Score0.923
Seed1
Au0.25
Energy-27.8
Binding len19
Me-7.103
Phylopstem0.30397701999999993
Phylopflank0.22254122999999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure