Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCCAGGACGGATCAATGCCAGG
..((((((((.((((((((((.&)))))).)))).))).....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127207
GeneSymbolSMARCAL1
Binding site2119,2145
Score0.846
Seed1
Au0.426
Energy-22.6
Binding len26
Me-7.782
Phylopstem2.8377636363636367
Phylopflank3.827173674999999
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure