Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCATCCCAAAATTTCCCAAGGGAGTCTTGTAAGCCAGTGA
((((((((.(((((((((.(((&.))))))).))))).......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127207
GeneSymbolSMARCAL1
Binding site283,325
Score0.846
Seed1
Au0.559
Energy-21.0
Binding len30
Me-4.994
Phylopstem-0.08534674
Phylopflank0.23331969499999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure