Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGAGCCC
....((((((.((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127222
GeneSymbolCACNA1A
Binding site6289,6304
Score0.846
Seed0
Au0.324
Energy-25.5
Binding len15
Me-12.371
Phylopstem5.95895275
Phylopflank4.921145058624999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure