Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTTAGAGGTGCTAA
...((((.(((((..(((((((&))))))).))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127228
GeneSymbolCBX1
Binding site1603,1622
Score0.846
Seed0
Au0.603
Energy-20.2
Binding len19
Me-10.42
Phylopstem4.378443099999999
Phylopflank4.607418282875001
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure