Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAGGGAAGGAGTTC
.((((((....(((((((((.&)))))))))..))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001127228
GeneSymbolCBX1
Binding site851,870
Score1.0
Seed1
Au0.515
Energy-23.0
Binding len19
Me-11.231
Phylopstem-0.16122944444444445
Phylopflank0.74895198375
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure