Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGCCCAGCCAGATAGGGGAAGGGGCCGA
...((((((((((((((((.((&)).))))))..........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127229
GeneSymbolAURKAIP1
Binding site553,583
Score0.846
Seed0
Au0.309
Energy-24.3
Binding len30
Me-6.515
Phylopstem0.012955096153846149
Phylopflank0.3874758575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure