Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCTGGAGCTGGA
..((((((((...((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127229
GeneSymbolAURKAIP1
Binding site410,427
Score0.923
Seed1
Au0.324
Energy-23.3
Binding len17
Me-12.418
Phylopstem2.167494375
Phylopflank2.2671930637499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure