Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGAGAGGTAACTGAGGACATGAGCAACCAGTGC
((((((..((((((((((....&))))))))))...................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127231
GeneSymbolAUTS2
Binding site5726,5762
Score0.974
Seed0
Au0.412
Energy-22.8
Binding len36
Me-7.795
Phylopstem-0.35220197
Phylopflank0.7560493975000002
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end4
Position3UTR
2D Structure