Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCCCCTGGTGCTTCCCCCCCTCCTCCTGGGAGGGGGCCCGTGA
(((.((((((((((((((..((&.))..)))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127240
GeneSymbolBBC3
Binding site1161,1208
Score1.0
Seed0
Au0.368
Energy-29.3
Binding len24
Me-6.97
Phylopstem0.9705831928571429
Phylopflank0.9844337112500001
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure