Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCCCCTGGTGCTTCCCCCCCTCCTCCTGGGAGGGGGCCCGTGA
(((.((((((((((((((..((&.))..)))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127241
GeneSymbolBBC3
Binding site872,919
Score0.923
Seed0
Au0.368
Energy-29.3
Binding len24
Me-6.97
Phylopstem2.5111764285714284
Phylopflank1.024880585
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure