Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATGTCCATGCCAGGTG
(((((((((...((((......&))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127242
GeneSymbolBBC3
Binding site92,110
Score0.846
Seed1
Au0.338
Energy-18.5
Binding len18
Me-11.352
Phylopstem1.7695837666666667
Phylopflank2.6996435987500007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure