Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCCCCTGGTGCTTCCCCCCCTCCTCCTGGGAGGGGGCCCGTGA
(((.((((((((((((((..((&.))..)))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127242
GeneSymbolBBC3
Binding site681,728
Score1.0
Seed0
Au0.368
Energy-29.3
Binding len24
Me-6.97
Phylopstem0.4559425714285715
Phylopflank1.3091146324999998
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure