Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGGACAGGCCAGTGG
((((((((..(((((((((...&)))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127258
GeneSymbolHHIPL1
Binding site1604,1624
Score0.846
Seed1
Au0.397
Energy-28.4
Binding len20
Me-6.236
Phylopstem0.5256436444444444
Phylopflank5.393168397499999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure