Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGTGGCAAGGCAGAGAGGAAAGGTCTGGAGCCAGTGT
((((((((((((((((((((..&))))..........)))))))))..........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127321
GeneSymbolCBX5
Binding site5860,5901
Score0.949
Seed1
Au0.485
Energy-24.8
Binding len41
Me-3.938
Phylopstem-0.17570860250000003
Phylopflank0.16490969875000003
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure