Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCATGTTTGCCAGGA
.(((((((.(((..(((((...&)))))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127322
GeneSymbolCBX5
Binding site4635,4654
Score0.846
Seed1
Au0.559
Energy-19.5
Binding len19
Me-6.996
Phylopstem-0.09156671428571424
Phylopflank-0.06698366937500003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure