Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGTGGCAAGGCAGAGAGGAAAGGTCTGGAGCCAGTGT
((((((((((((((((((((..&))))..........)))))))))..........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127322
GeneSymbolCBX5
Binding site6058,6099
Score0.949
Seed1
Au0.485
Energy-24.8
Binding len41
Me-3.938
Phylopstem0.08077612750000003
Phylopflank0.1526569325
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure