Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCACCTGGGTTGGAGGAAGGGCACGGTGG
(((((((.(((((((((((...&)))))...........)))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127366
GeneSymbolPAX3
Binding site2598,2629
Score0.846
Seed1
Au0.485
Energy-22.4
Binding len31
Me-6.251
Phylopstem4.658011454545455
Phylopflank5.03515939625
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure