Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGAGAAGAGATCCGAATCTGTGCCCAGCGCTAAAGGCTCAGTGTTAGCATGGCTTGTGCTGGCCGGTGT
((((((((((((((((((((.(&.).)))))))....)))))........................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127400
GeneSymbolYPEL5
Binding site1177,1248
Score0.923
Seed1
Au0.5
Energy-24.5
Binding len52
Me-3.938
Phylopstem3.2023194270833333
Phylopflank2.435020907
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure