Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTATCAGAGGTGAA
.....(((((((((((((...&))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001127448
GeneSymbolABAT
Binding site1853,1867
Score0.846
Seed0
Au0.574
Energy-15.5
Binding len14
Me-13.666
Phylopstem1.4348552630769231
Phylopflank1.0714299334999997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure