Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCAGAGAAGGGGGCATGTGG
(((..((((((((((..((...&))..))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127458
GeneSymbolCRLS1
Binding site2170,2190
Score0.923
Seed0
Au0.456
Energy-22.3
Binding len20
Me-11.322
Phylopstem-0.06295335000000002
Phylopflank-0.17318538500000003
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure