Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTACCACTGAATTACATTGTGTGACAGA
..(((.((((((((((((....&.)))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127510
GeneSymbolAPC
Binding site2885,2917
Score0.846
Seed0
Au0.588
Energy-17.9
Binding len18
Me-6.858
Phylopstem1.7915720083333335
Phylopflank3.615578740000001
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure