Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGGCAATTCCTCTTCATTGTAGGAGAAGGTGA
((((..(((((((((((((...&))))))))..................)))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127610
GeneSymbolBAAT
Binding site1099,1137
Score0.846
Seed0
Au0.5
Energy-22.9
Binding len38
Me-9.958
Phylopstem1.4921612903225803
Phylopflank1.6605250000000003
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end5
PositionCDS
2D Structure