Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACCCACCCAGAGATGGAGCTG
....(((((((((((((((...&.))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127670
GeneSymbolKCNE1
Binding site2357,2382
Score0.846
Seed0
Au0.309
Energy-25.4
Binding len18
Me-9.547
Phylopstem-0.299480271625
Phylopflank0.1861239779
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure